Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13□□□□□ -0.33
Zfp248Q640N4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Zfp248Q640N4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13□□□□□ -0.33
Zfp248Q640N4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13□□□□□ -0.33
Zfp248Q640N4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13□□□□□ -0.33
Zfp248Q640N4 Gm12382-201ENSMUST00000122005 922 ntBASIC13□□□□□ -0.33
Zfp248Q640N4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13□□□□□ -0.33
Zfp248Q640N4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13□□□□□ -0.33
Zfp248Q640N4 Gm20049-201ENSMUST00000219950 730 ntBASIC13□□□□□ -0.33
Zfp248Q640N4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Zfp248Q640N4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp248Q640N4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Zfp248Q640N4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.99□□□□□ -0.33
Zfp248Q640N4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Zfp248Q640N4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.99□□□□□ -0.33
Zfp248Q640N4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp248Q640N4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Gm42545-201ENSMUST00000202755 922 ntBASIC12.98□□□□□ -0.33
Zfp248Q640N4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.98□□□□□ -0.33
Zfp248Q640N4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.98□□□□□ -0.33
Zfp248Q640N4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Zfp248Q640N4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.97□□□□□ -0.33
Zfp248Q640N4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Zfp248Q640N4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.97□□□□□ -0.33
Zfp248Q640N4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms