Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.26■□□□□ 0.35
Foxj1Q61660 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.26■□□□□ 0.35
Foxj1Q61660 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.26■□□□□ 0.35
Foxj1Q61660 Mzt1-203ENSMUST00000227948 952 ntBASIC17.26■□□□□ 0.35
Foxj1Q61660 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Foxj1Q61660 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Foxj1Q61660 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxj1Q61660 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Gm24589-201ENSMUST00000116692 94 ntBASIC17.25■□□□□ 0.35
Foxj1Q61660 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.25■□□□□ 0.35
Foxj1Q61660 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Foxj1Q61660 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxj1Q61660 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.24■□□□□ 0.35
Foxj1Q61660 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxj1Q61660 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.24■□□□□ 0.35
Foxj1Q61660 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.23■□□□□ 0.35
Foxj1Q61660 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxj1Q61660 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Foxj1Q61660 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.22■□□□□ 0.35
Foxj1Q61660 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
Foxj1Q61660 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.22■□□□□ 0.35
Foxj1Q61660 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Foxj1Q61660 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxj1Q61660 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.21■□□□□ 0.35
Foxj1Q61660 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxj1Q61660 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxj1Q61660 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Foxj1Q61660 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxj1Q61660 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.21■□□□□ 0.35
Foxj1Q61660 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Foxj1Q61660 Gm18115-201ENSMUST00000221209 621 ntBASIC17.21■□□□□ 0.35
Foxj1Q61660 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms