Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Mtag2-201ENSMUST00000058665 714 ntBASIC15.73■□□□□ 0.11
Clcn4Q61418 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.73■□□□□ 0.11
Clcn4Q61418 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Clcn4Q61418 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clcn4Q61418 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Clcn4Q61418 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Clcn4Q61418 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.72■□□□□ 0.11
Clcn4Q61418 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.72■□□□□ 0.11
Clcn4Q61418 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.72■□□□□ 0.11
Clcn4Q61418 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Clcn4Q61418 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clcn4Q61418 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Clcn4Q61418 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
Clcn4Q61418 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.71■□□□□ 0.11
Clcn4Q61418 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.71■□□□□ 0.11
Clcn4Q61418 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clcn4Q61418 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clcn4Q61418 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Clcn4Q61418 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clcn4Q61418 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.7■□□□□ 0.1
Clcn4Q61418 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clcn4Q61418 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Gm15375-201ENSMUST00000119510 849 ntBASIC15.7■□□□□ 0.1
Clcn4Q61418 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.7■□□□□ 0.1
Clcn4Q61418 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clcn4Q61418 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.69■□□□□ 0.1
Clcn4Q61418 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Clcn4Q61418 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.69■□□□□ 0.1
Clcn4Q61418 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.69■□□□□ 0.1
Clcn4Q61418 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.69■□□□□ 0.1
Clcn4Q61418 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clcn4Q61418 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
Clcn4Q61418 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.69■□□□□ 0.1
Clcn4Q61418 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Clcn4Q61418 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clcn4Q61418 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clcn4Q61418 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clcn4Q61418 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms