Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Ift88Q61371 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ift88Q61371 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.89■□□□□ 0.61
Ift88Q61371 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ift88Q61371 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.88■□□□□ 0.61
Ift88Q61371 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Gm13158-201ENSMUST00000122007 736 ntBASIC18.88■□□□□ 0.61
Ift88Q61371 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.88■□□□□ 0.61
Ift88Q61371 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ift88Q61371 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ift88Q61371 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ift88Q61371 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.87■□□□□ 0.61
Ift88Q61371 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ift88Q61371 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.87■□□□□ 0.61
Ift88Q61371 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.87■□□□□ 0.61
Ift88Q61371 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.87■□□□□ 0.61
Ift88Q61371 Gm18025-201ENSMUST00000221733 862 ntBASIC18.87■□□□□ 0.61
Ift88Q61371 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ift88Q61371 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ift88Q61371 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ift88Q61371 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ift88Q61371 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ift88Q61371 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ift88Q61371 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ift88Q61371 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ift88Q61371 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.86■□□□□ 0.61
Ift88Q61371 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.86■□□□□ 0.61
Ift88Q61371 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.86■□□□□ 0.61
Ift88Q61371 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ift88Q61371 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.86■□□□□ 0.61
Ift88Q61371 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Ift88Q61371 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ift88Q61371 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ift88Q61371 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Ift88Q61371 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ift88Q61371 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ift88Q61371 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Gm42545-201ENSMUST00000202755 922 ntBASIC18.85■□□□□ 0.61
Ift88Q61371 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Gm10602-201ENSMUST00000098239 609 ntBASIC18.85■□□□□ 0.61
Ift88Q61371 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.85■□□□□ 0.61
Ift88Q61371 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ift88Q61371 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.84■□□□□ 0.61
Ift88Q61371 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ift88Q61371 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ift88Q61371 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.84■□□□□ 0.61
Ift88Q61371 Gm4974-201ENSMUST00000209974 875 ntBASIC18.84■□□□□ 0.61
Ift88Q61371 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ift88Q61371 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ift88Q61371 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms