Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.69■□□□□ 0.58
Cln3Q61124 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cln3Q61124 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cln3Q61124 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.69■□□□□ 0.58
Cln3Q61124 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cln3Q61124 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cln3Q61124 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cln3Q61124 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cln3Q61124 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.68■□□□□ 0.58
Cln3Q61124 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Gm11452-201ENSMUST00000122376 690 ntBASIC18.68■□□□□ 0.58
Cln3Q61124 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.68■□□□□ 0.58
Cln3Q61124 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.68■□□□□ 0.58
Cln3Q61124 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.68■□□□□ 0.58
Cln3Q61124 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cln3Q61124 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln3Q61124 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cln3Q61124 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cln3Q61124 Gm18421-201ENSMUST00000204122 625 ntBASIC18.67■□□□□ 0.58
Cln3Q61124 AW822252-206ENSMUST00000208904 237 ntBASIC18.67■□□□□ 0.58
Cln3Q61124 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cln3Q61124 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cln3Q61124 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cln3Q61124 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.67■□□□□ 0.58
Cln3Q61124 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.66■□□□□ 0.58
Cln3Q61124 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.66■□□□□ 0.58
Cln3Q61124 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.66■□□□□ 0.58
Cln3Q61124 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.66■□□□□ 0.58
Cln3Q61124 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.66■□□□□ 0.58
Cln3Q61124 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.66■□□□□ 0.58
Cln3Q61124 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cln3Q61124 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln3Q61124 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.65■□□□□ 0.58
Cln3Q61124 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.65■□□□□ 0.58
Cln3Q61124 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.65■□□□□ 0.58
Cln3Q61124 Gm29707-201ENSMUST00000196325 491 ntBASIC18.65■□□□□ 0.58
Cln3Q61124 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cln3Q61124 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cln3Q61124 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cln3Q61124 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cln3Q61124 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cln3Q61124 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cln3Q61124 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.64■□□□□ 0.57
Cln3Q61124 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Gm43514-201ENSMUST00000198852 424 ntBASIC18.64■□□□□ 0.57
Cln3Q61124 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.64■□□□□ 0.57
Cln3Q61124 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.64■□□□□ 0.57
Cln3Q61124 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln3Q61124 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.63■□□□□ 0.57
Cln3Q61124 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Cln3Q61124 Gm15372-201ENSMUST00000120729 834 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms