Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb1Q61009 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scarb1Q61009 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Gm7514-201ENSMUST00000209475 934 ntBASIC14.41□□□□□ -0.1
Scarb1Q61009 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.41□□□□□ -0.1
Scarb1Q61009 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scarb1Q61009 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Gm10493-201ENSMUST00000097270 612 ntBASIC14.4□□□□□ -0.1
Scarb1Q61009 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Scarb1Q61009 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scarb1Q61009 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Scarb1Q61009 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Scarb1Q61009 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scarb1Q61009 Mir8112-201ENSMUST00000184382 131 ntBASIC14.39□□□□□ -0.11
Scarb1Q61009 Gm29791-202ENSMUST00000207888 369 ntBASIC14.39□□□□□ -0.11
Scarb1Q61009 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.39□□□□□ -0.11
Scarb1Q61009 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.39□□□□□ -0.11
Scarb1Q61009 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scarb1Q61009 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scarb1Q61009 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scarb1Q61009 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scarb1Q61009 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.38□□□□□ -0.11
Scarb1Q61009 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.38□□□□□ -0.11
Scarb1Q61009 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.38□□□□□ -0.11
Scarb1Q61009 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scarb1Q61009 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scarb1Q61009 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms