Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Ripk1Q60855 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ripk1Q60855 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ripk1Q60855 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ripk1Q60855 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ripk1Q60855 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ripk1Q60855 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ripk1Q60855 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Ripk1Q60855 Gm24841-201ENSMUST00000158676 357 ntBASIC16.09■□□□□ 0.17
Ripk1Q60855 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ripk1Q60855 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ripk1Q60855 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ripk1Q60855 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ripk1Q60855 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ripk1Q60855 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.08■□□□□ 0.16
Ripk1Q60855 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ripk1Q60855 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.07■□□□□ 0.16
Ripk1Q60855 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ripk1Q60855 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ripk1Q60855 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.06■□□□□ 0.16
Ripk1Q60855 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ripk1Q60855 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ripk1Q60855 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.06■□□□□ 0.16
Ripk1Q60855 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.06■□□□□ 0.16
Ripk1Q60855 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ripk1Q60855 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ripk1Q60855 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.05■□□□□ 0.16
Ripk1Q60855 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ripk1Q60855 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ripk1Q60855 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.05■□□□□ 0.16
Ripk1Q60855 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ripk1Q60855 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ripk1Q60855 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ripk1Q60855 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ripk1Q60855 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ripk1Q60855 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ripk1Q60855 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ripk1Q60855 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms