Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc88aQ5SNZ0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc88aQ5SNZ0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc88aQ5SNZ0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc88aQ5SNZ0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.58■□□□□ 0.72
Ccdc88aQ5SNZ0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm27742-201ENSMUST00000184667 60 ntBASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc88aQ5SNZ0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm18206-201ENSMUST00000207027 926 ntBASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc88aQ5SNZ0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc88aQ5SNZ0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm8969-201ENSMUST00000199694 526 ntBASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm13884-201ENSMUST00000118103 829 ntBASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc88aQ5SNZ0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc88aQ5SNZ0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc88aQ5SNZ0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc88aQ5SNZ0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc88aQ5SNZ0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc88aQ5SNZ0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc88aQ5SNZ0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms