Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Gm15794-201ENSMUST00000120182 631 ntBASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Mzt1-203ENSMUST00000227948 952 ntBASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf43Q5NCP0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf43Q5NCP0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.33■□□□□ 0.37
Rnf43Q5NCP0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf43Q5NCP0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf43Q5NCP0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf43Q5NCP0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf43Q5NCP0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf43Q5NCP0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms