Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 AV026068-213ENSMUST00000223675 1171 ntBASIC17.32■□□□□ 0.36
Bdp1Q571C7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Bdp1Q571C7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.31■□□□□ 0.36
Bdp1Q571C7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.31■□□□□ 0.36
Bdp1Q571C7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Bdp1Q571C7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Bdp1Q571C7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Bdp1Q571C7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Bdp1Q571C7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.3■□□□□ 0.36
Bdp1Q571C7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Gm13616-201ENSMUST00000120600 222 ntBASIC17.3■□□□□ 0.36
Bdp1Q571C7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.3■□□□□ 0.36
Bdp1Q571C7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Bdp1Q571C7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Bdp1Q571C7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Gm11424-201ENSMUST00000121929 829 ntBASIC17.28■□□□□ 0.36
Bdp1Q571C7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.28■□□□□ 0.36
Bdp1Q571C7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.28■□□□□ 0.36
Bdp1Q571C7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Bdp1Q571C7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms