Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.64■□□□□ 0.41
Trim80Q3V061 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim80Q3V061 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim80Q3V061 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim80Q3V061 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.63■□□□□ 0.41
Trim80Q3V061 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim80Q3V061 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim80Q3V061 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.62■□□□□ 0.41
Trim80Q3V061 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim80Q3V061 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.62■□□□□ 0.41
Trim80Q3V061 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim80Q3V061 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim80Q3V061 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim80Q3V061 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.61■□□□□ 0.41
Trim80Q3V061 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim80Q3V061 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim80Q3V061 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim80Q3V061 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim80Q3V061 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim80Q3V061 Mir6982-201ENSMUST00000184354 68 ntBASIC17.6■□□□□ 0.41
Trim80Q3V061 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms