Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Gm6365-201ENSMUST00000054711 744 ntBASIC16.82■□□□□ 0.28
Tmed1Q3V009 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmed1Q3V009 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Gm10849-201ENSMUST00000100397 618 ntBASIC16.81■□□□□ 0.28
Tmed1Q3V009 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
Tmed1Q3V009 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.81■□□□□ 0.28
Tmed1Q3V009 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Tmed1Q3V009 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Gm38285-201ENSMUST00000192928 922 ntBASIC16.8■□□□□ 0.28
Tmed1Q3V009 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Tmed1Q3V009 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.79■□□□□ 0.28
Tmed1Q3V009 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmed1Q3V009 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.78■□□□□ 0.28
Tmed1Q3V009 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tmed1Q3V009 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms