Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf223Q3UV31 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf223Q3UV31 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Gm29518-201ENSMUST00000190858 372 ntBASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Gm37722-201ENSMUST00000193757 208 ntBASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Gm10819-201ENSMUST00000099988 561 ntBASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rnf223Q3UV31 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf223Q3UV31 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf223Q3UV31 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf223Q3UV31 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.52■□□□□ 0.23
Rnf223Q3UV31 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf223Q3UV31 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf223Q3UV31 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf223Q3UV31 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms