Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lsmem1Q3UQS2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsmem1Q3UQS2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsmem1Q3UQS2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Gm13474-201ENSMUST00000122466 815 ntBASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsmem1Q3UQS2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Gm18959-201ENSMUST00000208954 655 ntBASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsmem1Q3UQS2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Gm9987-201ENSMUST00000069768 567 ntBASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsmem1Q3UQS2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lsmem1Q3UQS2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsmem1Q3UQS2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsmem1Q3UQS2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms