Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smcr8Q3UMB5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smcr8Q3UMB5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smcr8Q3UMB5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smcr8Q3UMB5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smcr8Q3UMB5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smcr8Q3UMB5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smcr8Q3UMB5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Gm14859-201ENSMUST00000117752 357 ntBASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smcr8Q3UMB5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smcr8Q3UMB5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms