Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cops9Q3U898 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cops9Q3U898 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Gm10418-201ENSMUST00000100943 576 ntBASIC11.74□□□□□ -0.53
Cops9Q3U898 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.74□□□□□ -0.53
Cops9Q3U898 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cops9Q3U898 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cops9Q3U898 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.74□□□□□ -0.53
Cops9Q3U898 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cops9Q3U898 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.74□□□□□ -0.53
Cops9Q3U898 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cops9Q3U898 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.73□□□□□ -0.53
Cops9Q3U898 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.73□□□□□ -0.53
Cops9Q3U898 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cops9Q3U898 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cops9Q3U898 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.72□□□□□ -0.53
Cops9Q3U898 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cops9Q3U898 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Cops9Q3U898 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.72□□□□□ -0.53
Cops9Q3U898 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Cops9Q3U898 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.72□□□□□ -0.53
Cops9Q3U898 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cops9Q3U898 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.71□□□□□ -0.53
Cops9Q3U898 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops9Q3U898 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops9Q3U898 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cops9Q3U898 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops9Q3U898 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops9Q3U898 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops9Q3U898 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops9Q3U898 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms