Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp4Q3U4B1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssbp4Q3U4B1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ssbp4Q3U4B1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssbp4Q3U4B1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp4Q3U4B1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ssbp4Q3U4B1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp4Q3U4B1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp4Q3U4B1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms