Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim72Q1XH17 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim72Q1XH17 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Gm5417-201ENSMUST00000079706 384 ntBASIC18.17■□□□□ 0.5
Trim72Q1XH17 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim72Q1XH17 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Gm37055-201ENSMUST00000191866 133 ntBASIC18.16■□□□□ 0.5
Trim72Q1XH17 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim72Q1XH17 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.15■□□□□ 0.5
Trim72Q1XH17 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim72Q1XH17 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim72Q1XH17 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms