Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Gm14140-201ENSMUST00000119999 995 ntBASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Gm25911-201ENSMUST00000157621 56 ntBASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.21■□□□□ 0.51
Col19a1Q0VF58 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Col19a1Q0VF58 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Gm7230-201ENSMUST00000173026 815 ntBASIC18.2■□□□□ 0.5
Col19a1Q0VF58 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.2■□□□□ 0.5
Col19a1Q0VF58 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Fst-202ENSMUST00000223640 2612 ntBASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col19a1Q0VF58 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Gm9727-201ENSMUST00000161387 555 ntBASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Gm6089-201ENSMUST00000197666 938 ntBASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.19■□□□□ 0.5
Col19a1Q0VF58 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Idnk-204ENSMUST00000226010 1898 ntBASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Gm44450-201ENSMUST00000199528 114 ntBASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col19a1Q0VF58 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Gm8097-201ENSMUST00000117903 829 ntBASIC18.17■□□□□ 0.5
Col19a1Q0VF58 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col19a1Q0VF58 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Gm18421-201ENSMUST00000204122 625 ntBASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col19a1Q0VF58 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms