Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tff1Q08423 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tff1Q08423 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.19□□□□□ -0.14
Tff1Q08423 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.19□□□□□ -0.14
Tff1Q08423 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tff1Q08423 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tff1Q08423 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff1Q08423 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tff1Q08423 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.18□□□□□ -0.14
Tff1Q08423 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tff1Q08423 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tff1Q08423 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.18□□□□□ -0.14
Tff1Q08423 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tff1Q08423 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tff1Q08423 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tff1Q08423 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff1Q08423 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tff1Q08423 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.17□□□□□ -0.14
Tff1Q08423 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.17□□□□□ -0.14
Tff1Q08423 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Flg-201ENSMUST00000050758 1488 ntBASIC14.17□□□□□ -0.14
Tff1Q08423 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Tff1Q08423 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tff1Q08423 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff1Q08423 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tff1Q08423 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Gm13401-201ENSMUST00000117074 291 ntBASIC14.16□□□□□ -0.14
Tff1Q08423 Gm11927-201ENSMUST00000118472 759 ntBASIC14.16□□□□□ -0.14
Tff1Q08423 Gm15565-201ENSMUST00000118890 427 ntBASIC14.16□□□□□ -0.14
Tff1Q08423 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Tff1Q08423 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff1Q08423 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tff1Q08423 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms