Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.91■□□□□ 0.14
Emx1Q04742 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.91■□□□□ 0.14
Emx1Q04742 Gm2559-201ENSMUST00000201323 363 ntBASIC15.91■□□□□ 0.14
Emx1Q04742 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.91■□□□□ 0.14
Emx1Q04742 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Emx1Q04742 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Emx1Q04742 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Emx1Q04742 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.9■□□□□ 0.14
Emx1Q04742 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Emx1Q04742 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Emx1Q04742 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Emx1Q04742 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Emx1Q04742 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Mir6982-201ENSMUST00000184354 68 ntBASIC15.9■□□□□ 0.14
Emx1Q04742 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Emx1Q04742 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Emx1Q04742 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.9■□□□□ 0.14
Emx1Q04742 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Emx1Q04742 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Emx1Q04742 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Emx1Q04742 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Emx1Q04742 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.89■□□□□ 0.13
Emx1Q04742 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.89■□□□□ 0.13
Emx1Q04742 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.89■□□□□ 0.13
Emx1Q04742 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.89■□□□□ 0.13
Emx1Q04742 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Emx1Q04742 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Emx1Q04742 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.88■□□□□ 0.13
Emx1Q04742 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.88■□□□□ 0.13
Emx1Q04742 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.88■□□□□ 0.13
Emx1Q04742 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.88■□□□□ 0.13
Emx1Q04742 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Emx1Q04742 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Emx1Q04742 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.87■□□□□ 0.13
Emx1Q04742 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Emx1Q04742 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms