Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Gm18421-201ENSMUST00000204122 625 ntBASIC21.51■■□□□ 1.03
Nkx2-3P97334 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.51■■□□□ 1.03
Nkx2-3P97334 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.51■■□□□ 1.03
Nkx2-3P97334 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Gm5864-201ENSMUST00000202263 970 ntBASIC21.5■■□□□ 1.03
Nkx2-3P97334 Mzt1-203ENSMUST00000227948 952 ntBASIC21.5■■□□□ 1.03
Nkx2-3P97334 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-3P97334 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.49■■□□□ 1.03
Nkx2-3P97334 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.49■■□□□ 1.03
Nkx2-3P97334 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-3P97334 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.48■■□□□ 1.03
Nkx2-3P97334 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.48■■□□□ 1.03
Nkx2-3P97334 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Nkx2-3P97334 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.47■■□□□ 1.03
Nkx2-3P97334 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-3P97334 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.46■■□□□ 1.03
Nkx2-3P97334 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Gm13884-201ENSMUST00000118103 829 ntBASIC21.46■■□□□ 1.03
Nkx2-3P97334 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-3P97334 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Nkx2-3P97334 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.45■■□□□ 1.02
Nkx2-3P97334 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-3P97334 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-3P97334 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.45■■□□□ 1.02
Nkx2-3P97334 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-3P97334 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-3P97334 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Nkx2-3P97334 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-3P97334 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-3P97334 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.44■■□□□ 1.02
Nkx2-3P97334 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.44■■□□□ 1.02
Nkx2-3P97334 Gm29707-201ENSMUST00000196325 491 ntBASIC21.44■■□□□ 1.02
Nkx2-3P97334 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 AW822252-206ENSMUST00000208904 237 ntBASIC21.44■■□□□ 1.02
Nkx2-3P97334 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms