Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CiitaP79621 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CiitaP79621 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CiitaP79621 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CiitaP79621 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.49■□□□□ 0.55
CiitaP79621 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.49■□□□□ 0.55
CiitaP79621 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CiitaP79621 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.48■□□□□ 0.55
CiitaP79621 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CiitaP79621 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.48■□□□□ 0.55
CiitaP79621 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CiitaP79621 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CiitaP79621 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CiitaP79621 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CiitaP79621 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CiitaP79621 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.47■□□□□ 0.55
CiitaP79621 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.47■□□□□ 0.55
CiitaP79621 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.47■□□□□ 0.55
CiitaP79621 Gm33142-201ENSMUST00000193913 867 ntBASIC18.47■□□□□ 0.55
CiitaP79621 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.47■□□□□ 0.55
CiitaP79621 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CiitaP79621 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
CiitaP79621 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CiitaP79621 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.46■□□□□ 0.55
CiitaP79621 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CiitaP79621 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CiitaP79621 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.46■□□□□ 0.55
CiitaP79621 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CiitaP79621 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CiitaP79621 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CiitaP79621 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.46■□□□□ 0.55
CiitaP79621 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CiitaP79621 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.46■□□□□ 0.55
CiitaP79621 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CiitaP79621 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.46■□□□□ 0.55
CiitaP79621 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CiitaP79621 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.45■□□□□ 0.54
CiitaP79621 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CiitaP79621 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CiitaP79621 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.45■□□□□ 0.54
CiitaP79621 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms