Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Shox2P70390 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.93■□□□□ 0.3
Shox2P70390 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Shox2P70390 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.93■□□□□ 0.3
Shox2P70390 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.93■□□□□ 0.3
Shox2P70390 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Shox2P70390 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.93■□□□□ 0.3
Shox2P70390 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Shox2P70390 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.93■□□□□ 0.3
Shox2P70390 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Shox2P70390 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.92■□□□□ 0.3
Shox2P70390 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Shox2P70390 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Shox2P70390 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
Shox2P70390 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Shox2P70390 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Shox2P70390 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Shox2P70390 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Shox2P70390 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shox2P70390 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Shox2P70390 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Shox2P70390 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Shox2P70390 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.91■□□□□ 0.3
Shox2P70390 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Shox2P70390 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shox2P70390 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Reep4-203ENSMUST00000226563 1444 ntBASIC16.9■□□□□ 0.3
Shox2P70390 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shox2P70390 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.9■□□□□ 0.3
Shox2P70390 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.9■□□□□ 0.3
Shox2P70390 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Shox2P70390 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.9■□□□□ 0.3
Shox2P70390 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shox2P70390 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.89■□□□□ 0.3
Shox2P70390 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Shox2P70390 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.89■□□□□ 0.3
Shox2P70390 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shox2P70390 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shox2P70390 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Shox2P70390 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Shox2P70390 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Shox2P70390 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shox2P70390 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms