Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
Frat1P70339 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Frat1P70339 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Frat1P70339 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.58■□□□□ 0.57
Frat1P70339 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Frat1P70339 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Frat1P70339 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.58■□□□□ 0.57
Frat1P70339 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Frat1P70339 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.58■□□□□ 0.57
Frat1P70339 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Frat1P70339 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Frat1P70339 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.58■□□□□ 0.56
Frat1P70339 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Frat1P70339 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Frat1P70339 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frat1P70339 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Frat1P70339 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.57■□□□□ 0.56
Frat1P70339 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Frat1P70339 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Gm43017-201ENSMUST00000198296 752 ntBASIC18.57■□□□□ 0.56
Frat1P70339 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Frat1P70339 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.57■□□□□ 0.56
Frat1P70339 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Frat1P70339 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.56■□□□□ 0.56
Frat1P70339 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Frat1P70339 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frat1P70339 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.55■□□□□ 0.56
Frat1P70339 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.55■□□□□ 0.56
Frat1P70339 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Frat1P70339 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Frat1P70339 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.55■□□□□ 0.56
Frat1P70339 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frat1P70339 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.54■□□□□ 0.56
Frat1P70339 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.54■□□□□ 0.56
Frat1P70339 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Frat1P70339 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.54■□□□□ 0.56
Frat1P70339 Nespas-201ENSMUST00000143738 1083 ntBASIC18.54■□□□□ 0.56
Frat1P70339 Gm6420-201ENSMUST00000193885 723 ntBASIC18.54■□□□□ 0.56
Frat1P70339 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frat1P70339 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms