Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim4P70271 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.19□□□□□ -0.14
Pdlim4P70271 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pdlim4P70271 Mir5122-201ENSMUST00000175004 89 ntBASIC14.19□□□□□ -0.14
Pdlim4P70271 Gm10252-201ENSMUST00000209541 832 ntBASIC14.19□□□□□ -0.14
Pdlim4P70271 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.19□□□□□ -0.14
Pdlim4P70271 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim4P70271 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim4P70271 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.18□□□□□ -0.14
Pdlim4P70271 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.18□□□□□ -0.14
Pdlim4P70271 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pdlim4P70271 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.18□□□□□ -0.14
Pdlim4P70271 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.18□□□□□ -0.14
Pdlim4P70271 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.18□□□□□ -0.14
Pdlim4P70271 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pdlim4P70271 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim4P70271 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.18□□□□□ -0.14
Pdlim4P70271 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdlim4P70271 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pdlim4P70271 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pdlim4P70271 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Gm24841-201ENSMUST00000158676 357 ntBASIC14.17□□□□□ -0.14
Pdlim4P70271 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Odf3b-204ENSMUST00000227834 930 ntBASIC14.17□□□□□ -0.14
Pdlim4P70271 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim4P70271 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim4P70271 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pdlim4P70271 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.16□□□□□ -0.14
Pdlim4P70271 Gm37055-201ENSMUST00000191866 133 ntBASIC14.16□□□□□ -0.14
Pdlim4P70271 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Gm5417-201ENSMUST00000079706 384 ntBASIC14.16□□□□□ -0.14
Pdlim4P70271 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.16□□□□□ -0.14
Pdlim4P70271 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim4P70271 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pdlim4P70271 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pdlim4P70271 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms