Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.26■□□□□ 0.35
ThraP63058 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Gm13559-201ENSMUST00000120476 863 ntBASIC17.26■□□□□ 0.35
ThraP63058 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.26■□□□□ 0.35
ThraP63058 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.26■□□□□ 0.35
ThraP63058 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ThraP63058 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ThraP63058 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.25■□□□□ 0.35
ThraP63058 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ThraP63058 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.25■□□□□ 0.35
ThraP63058 Gm11539-201ENSMUST00000119837 557 ntBASIC17.25■□□□□ 0.35
ThraP63058 Gm13436-201ENSMUST00000120418 567 ntBASIC17.25■□□□□ 0.35
ThraP63058 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.25■□□□□ 0.35
ThraP63058 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.25■□□□□ 0.35
ThraP63058 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.25■□□□□ 0.35
ThraP63058 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ThraP63058 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.25■□□□□ 0.35
ThraP63058 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ThraP63058 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ThraP63058 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Mir2861-201ENSMUST00000175539 82 ntBASIC17.24■□□□□ 0.35
ThraP63058 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ThraP63058 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ThraP63058 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ThraP63058 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.23■□□□□ 0.35
ThraP63058 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.23■□□□□ 0.35
ThraP63058 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ThraP63058 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.23■□□□□ 0.35
ThraP63058 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ThraP63058 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ThraP63058 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ThraP63058 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.22■□□□□ 0.35
ThraP63058 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.22■□□□□ 0.35
ThraP63058 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ThraP63058 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms