Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ybx1P62960 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.46■□□□□ 0.39
Ybx1P62960 Gm45328-201ENSMUST00000210942 917 ntBASIC17.46■□□□□ 0.39
Ybx1P62960 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.45■□□□□ 0.38
Ybx1P62960 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ybx1P62960 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.45■□□□□ 0.38
Ybx1P62960 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ybx1P62960 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ybx1P62960 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ybx1P62960 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.45■□□□□ 0.38
Ybx1P62960 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.44■□□□□ 0.38
Ybx1P62960 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Gm34391-201ENSMUST00000203706 907 ntBASIC17.44■□□□□ 0.38
Ybx1P62960 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.44■□□□□ 0.38
Ybx1P62960 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ybx1P62960 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ybx1P62960 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ybx1P62960 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ybx1P62960 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ybx1P62960 Gm15794-201ENSMUST00000120182 631 ntBASIC17.43■□□□□ 0.38
Ybx1P62960 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.43■□□□□ 0.38
Ybx1P62960 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.43■□□□□ 0.38
Ybx1P62960 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.43■□□□□ 0.38
Ybx1P62960 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Ybx1P62960 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ybx1P62960 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ybx1P62960 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
Ybx1P62960 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ybx1P62960 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ybx1P62960 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ybx1P62960 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.42■□□□□ 0.38
Ybx1P62960 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ybx1P62960 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ybx1P62960 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Ybx1P62960 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.41■□□□□ 0.38
Ybx1P62960 Gm44771-201ENSMUST00000206975 626 ntBASIC17.41■□□□□ 0.38
Ybx1P62960 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ybx1P62960 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.41■□□□□ 0.38
Ybx1P62960 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ybx1P62960 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ybx1P62960 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms