Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.3□□□□□ -0.12
Lsm5P62322 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Lsm5P62322 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.3□□□□□ -0.12
Lsm5P62322 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lsm5P62322 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.3□□□□□ -0.12
Lsm5P62322 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lsm5P62322 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lsm5P62322 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.3□□□□□ -0.12
Lsm5P62322 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.3□□□□□ -0.12
Lsm5P62322 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lsm5P62322 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm5P62322 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lsm5P62322 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.29□□□□□ -0.12
Lsm5P62322 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lsm5P62322 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Lsm5P62322 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lsm5P62322 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm5P62322 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm5P62322 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Lsm5P62322 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Lsm5P62322 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Lsm5P62322 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lsm5P62322 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.28□□□□□ -0.12
Lsm5P62322 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lsm5P62322 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.28□□□□□ -0.12
Lsm5P62322 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm5P62322 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm5P62322 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm5P62322 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.27□□□□□ -0.12
Lsm5P62322 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.27□□□□□ -0.12
Lsm5P62322 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm5P62322 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lsm5P62322 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lsm5P62322 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.27□□□□□ -0.13
Lsm5P62322 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Gm9988-201ENSMUST00000069786 435 ntBASIC14.27□□□□□ -0.13
Lsm5P62322 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lsm5P62322 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.27□□□□□ -0.13
Lsm5P62322 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lsm5P62322 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm5P62322 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lsm5P62322 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
Lsm5P62322 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms