Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cks1bP61025 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Gm12821-201ENSMUST00000120022 600 ntBASIC12.19□□□□□ -0.46
Cks1bP61025 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Gm26833-201ENSMUST00000180899 440 ntBASIC12.19□□□□□ -0.46
Cks1bP61025 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cks1bP61025 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cks1bP61025 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cks1bP61025 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cks1bP61025 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.18□□□□□ -0.46
Cks1bP61025 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.18□□□□□ -0.46
Cks1bP61025 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.18□□□□□ -0.46
Cks1bP61025 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.18□□□□□ -0.46
Cks1bP61025 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cks1bP61025 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Cks1bP61025 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.18□□□□□ -0.46
Cks1bP61025 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.18□□□□□ -0.46
Cks1bP61025 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.18□□□□□ -0.46
Cks1bP61025 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.18□□□□□ -0.46
Cks1bP61025 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.18□□□□□ -0.46
Cks1bP61025 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cks1bP61025 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.17□□□□□ -0.46
Cks1bP61025 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.17□□□□□ -0.46
Cks1bP61025 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Gm38205-201ENSMUST00000192243 258 ntBASIC12.17□□□□□ -0.46
Cks1bP61025 Gm40848-201ENSMUST00000221998 324 ntBASIC12.17□□□□□ -0.46
Cks1bP61025 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Cks1bP61025 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cks1bP61025 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.16□□□□□ -0.46
Cks1bP61025 Gm43173-201ENSMUST00000202246 593 ntBASIC12.16□□□□□ -0.46
Cks1bP61025 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms