Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33bP59016 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33bP59016 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.59■■□□□ 1.05
Vps33bP59016 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33bP59016 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33bP59016 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.58■■□□□ 1.05
Vps33bP59016 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33bP59016 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
Vps33bP59016 Fst-202ENSMUST00000223640 2612 ntBASIC21.58■■□□□ 1.04
Vps33bP59016 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.57■■□□□ 1.04
Vps33bP59016 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Gm23935-201ENSMUST00000102303 57 ntBASIC21.57■■□□□ 1.04
Vps33bP59016 Gm24270-201ENSMUST00000102326 57 ntBASIC21.57■■□□□ 1.04
Vps33bP59016 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Gm24245-201ENSMUST00000157318 57 ntBASIC21.57■■□□□ 1.04
Vps33bP59016 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.57■■□□□ 1.04
Vps33bP59016 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps33bP59016 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.57■■□□□ 1.04
Vps33bP59016 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33bP59016 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33bP59016 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Vps33bP59016 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps33bP59016 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps33bP59016 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Vps33bP59016 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Vps33bP59016 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33bP59016 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Vps33bP59016 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33bP59016 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33bP59016 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33bP59016 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vps33bP59016 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Vps33bP59016 Gm4535-201ENSMUST00000182274 558 ntBASIC21.55■■□□□ 1.04
Vps33bP59016 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Gm10355-201ENSMUST00000097146 517 ntBASIC21.55■■□□□ 1.04
Vps33bP59016 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Vps33bP59016 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33bP59016 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33bP59016 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33bP59016 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33bP59016 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Vps33bP59016 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33bP59016 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.54■■□□□ 1.04
Vps33bP59016 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.54■■□□□ 1.04
Vps33bP59016 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33bP59016 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.53■■□□□ 1.04
Vps33bP59016 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vps33bP59016 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Vps33bP59016 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
Vps33bP59016 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.53■■□□□ 1.04
Vps33bP59016 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
Vps33bP59016 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33bP59016 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33bP59016 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.52■■□□□ 1.04
Vps33bP59016 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.52■■□□□ 1.04
Vps33bP59016 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.52■■□□□ 1.04
Vps33bP59016 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Vps33bP59016 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33bP59016 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms