Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.25■□□□□ 0.67
Rrp1P56183 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.25■□□□□ 0.67
Rrp1P56183 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.25■□□□□ 0.67
Rrp1P56183 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rrp1P56183 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.25■□□□□ 0.67
Rrp1P56183 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1P56183 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1P56183 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Gm12896-201ENSMUST00000118430 226 ntBASIC19.23■□□□□ 0.67
Rrp1P56183 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.23■□□□□ 0.67
Rrp1P56183 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rrp1P56183 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Rrp1P56183 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1P56183 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rrp1P56183 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.22■□□□□ 0.67
Rrp1P56183 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.22■□□□□ 0.67
Rrp1P56183 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rrp1P56183 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1P56183 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
Rrp1P56183 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rrp1P56183 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rrp1P56183 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rrp1P56183 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Gm18025-201ENSMUST00000221733 862 ntBASIC19.21■□□□□ 0.67
Rrp1P56183 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Rrp1P56183 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp1P56183 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Rrp1P56183 Gm4974-201ENSMUST00000209974 875 ntBASIC19.2■□□□□ 0.66
Rrp1P56183 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rrp1P56183 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Rrp1P56183 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp1P56183 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms