Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cdh11P55288 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Cdh11P55288 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cdh11P55288 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdh11P55288 Gm11927-201ENSMUST00000118472 759 ntBASIC15.55■□□□□ 0.08
Cdh11P55288 Gm15378-201ENSMUST00000121894 207 ntBASIC15.55■□□□□ 0.08
Cdh11P55288 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdh11P55288 Mir6982-201ENSMUST00000184354 68 ntBASIC15.55■□□□□ 0.08
Cdh11P55288 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdh11P55288 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdh11P55288 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Cdh11P55288 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdh11P55288 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.55■□□□□ 0.08
Cdh11P55288 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh11P55288 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdh11P55288 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdh11P55288 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cdh11P55288 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh11P55288 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cdh11P55288 Mir7071-201ENSMUST00000184847 69 ntBASIC15.54■□□□□ 0.08
Cdh11P55288 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.54■□□□□ 0.08
Cdh11P55288 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh11P55288 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.54■□□□□ 0.08
Cdh11P55288 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.54■□□□□ 0.08
Cdh11P55288 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh11P55288 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh11P55288 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cdh11P55288 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdh11P55288 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdh11P55288 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.53■□□□□ 0.08
Cdh11P55288 Gm10698-201ENSMUST00000182663 604 ntBASIC15.53■□□□□ 0.08
Cdh11P55288 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdh11P55288 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh11P55288 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdh11P55288 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cdh11P55288 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cdh11P55288 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cdh11P55288 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cdh11P55288 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.52■□□□□ 0.08
Cdh11P55288 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdh11P55288 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.52■□□□□ 0.08
Cdh11P55288 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdh11P55288 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh11P55288 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cdh11P55288 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh11P55288 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh11P55288 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh11P55288 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdh11P55288 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh11P55288 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh11P55288 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh11P55288 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh11P55288 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms