Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NcanP55066 Gm15590-201ENSMUST00000078419 552 ntBASIC18.02■□□□□ 0.48
NcanP55066 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NcanP55066 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NcanP55066 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NcanP55066 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
NcanP55066 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NcanP55066 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NcanP55066 Gm44450-201ENSMUST00000199528 114 ntBASIC18.01■□□□□ 0.47
NcanP55066 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.01■□□□□ 0.47
NcanP55066 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.01■□□□□ 0.47
NcanP55066 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.01■□□□□ 0.47
NcanP55066 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NcanP55066 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.01■□□□□ 0.47
NcanP55066 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NcanP55066 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NcanP55066 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NcanP55066 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18■□□□□ 0.47
NcanP55066 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 AC151286.1-201ENSMUST00000198489 145 ntBASIC18■□□□□ 0.47
NcanP55066 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18■□□□□ 0.47
NcanP55066 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Gm5784-201ENSMUST00000179344 2478 ntBASIC18■□□□□ 0.47
NcanP55066 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NcanP55066 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18■□□□□ 0.47
NcanP55066 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NcanP55066 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NcanP55066 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
NcanP55066 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NcanP55066 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.99■□□□□ 0.47
NcanP55066 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Gm44872-201ENSMUST00000207864 420 ntBASIC17.99■□□□□ 0.47
NcanP55066 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NcanP55066 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.99■□□□□ 0.47
NcanP55066 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NcanP55066 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NcanP55066 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.98■□□□□ 0.47
NcanP55066 Gm15173-201ENSMUST00000122049 433 ntBASIC17.98■□□□□ 0.47
NcanP55066 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NcanP55066 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NcanP55066 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NcanP55066 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NcanP55066 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.97■□□□□ 0.47
NcanP55066 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Gm13418-201ENSMUST00000119097 944 ntBASIC17.97■□□□□ 0.47
NcanP55066 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.97■□□□□ 0.47
NcanP55066 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.97■□□□□ 0.47
NcanP55066 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NcanP55066 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms