Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nub1P54729 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.34■□□□□ 0.53
Nub1P54729 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Nub1P54729 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.34■□□□□ 0.53
Nub1P54729 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.34■□□□□ 0.53
Nub1P54729 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.34■□□□□ 0.53
Nub1P54729 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nub1P54729 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nub1P54729 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
Nub1P54729 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nub1P54729 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nub1P54729 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Nub1P54729 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.33■□□□□ 0.52
Nub1P54729 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Nub1P54729 Gm9731-201ENSMUST00000209480 747 ntBASIC18.33■□□□□ 0.52
Nub1P54729 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nub1P54729 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nub1P54729 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nub1P54729 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nub1P54729 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.32■□□□□ 0.52
Nub1P54729 Gm30025-201ENSMUST00000218555 728 ntBASIC18.32■□□□□ 0.52
Nub1P54729 Gm7791-201ENSMUST00000219066 539 ntBASIC18.32■□□□□ 0.52
Nub1P54729 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.32■□□□□ 0.52
Nub1P54729 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nub1P54729 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Nub1P54729 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Nub1P54729 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Nub1P54729 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.31■□□□□ 0.52
Nub1P54729 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.31■□□□□ 0.52
Nub1P54729 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nub1P54729 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.31■□□□□ 0.52
Nub1P54729 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.31■□□□□ 0.52
Nub1P54729 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.31■□□□□ 0.52
Nub1P54729 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nub1P54729 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.31■□□□□ 0.52
Nub1P54729 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nub1P54729 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.3■□□□□ 0.52
Nub1P54729 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Gm15565-201ENSMUST00000118890 427 ntBASIC18.3■□□□□ 0.52
Nub1P54729 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.3■□□□□ 0.52
Nub1P54729 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.3■□□□□ 0.52
Nub1P54729 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.3■□□□□ 0.52
Nub1P54729 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nub1P54729 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms