Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.63■■□□□ 1.05
Msh6P54276 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.63■■□□□ 1.05
Msh6P54276 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.63■■□□□ 1.05
Msh6P54276 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh6P54276 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.63■■□□□ 1.05
Msh6P54276 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh6P54276 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.63■■□□□ 1.05
Msh6P54276 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Msh6P54276 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Msh6P54276 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh6P54276 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Msh6P54276 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Msh6P54276 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Msh6P54276 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.62■■□□□ 1.05
Msh6P54276 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh6P54276 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.62■■□□□ 1.05
Msh6P54276 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.61■■□□□ 1.05
Msh6P54276 Mir8098-201ENSMUST00000184011 137 ntBASIC21.61■■□□□ 1.05
Msh6P54276 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Msh6P54276 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Rarb-207ENSMUST00000225921 2756 ntBASIC21.61■■□□□ 1.05
Msh6P54276 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Msh6P54276 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Msh6P54276 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Msh6P54276 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh6P54276 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Msh6P54276 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Msh6P54276 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Msh6P54276 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Gm12895-201ENSMUST00000122214 226 ntBASIC21.6■■□□□ 1.05
Msh6P54276 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Msh6P54276 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Msh6P54276 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Msh6P54276 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.59■■□□□ 1.05
Msh6P54276 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Msh6P54276 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.59■■□□□ 1.05
Msh6P54276 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.59■■□□□ 1.05
Msh6P54276 Gm5864-201ENSMUST00000202263 970 ntBASIC21.59■■□□□ 1.05
Msh6P54276 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Msh6P54276 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh6P54276 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Msh6P54276 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Msh6P54276 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Msh6P54276 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Msh6P54276 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Msh6P54276 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Msh6P54276 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Msh6P54276 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Msh6P54276 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.58■■□□□ 1.04
Msh6P54276 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Msh6P54276 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Msh6P54276 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.58■■□□□ 1.04
Msh6P54276 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Msh6P54276 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.57■■□□□ 1.04
Msh6P54276 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Msh6P54276 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh6P54276 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms