Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nek1P51954 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nek1P51954 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nek1P51954 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nek1P51954 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nek1P51954 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nek1P51954 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nek1P51954 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Nek1P51954 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nek1P51954 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.01■□□□□ 0.63
Nek1P51954 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.01■□□□□ 0.63
Nek1P51954 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nek1P51954 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Nek1P51954 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19■□□□□ 0.63
Nek1P51954 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19■□□□□ 0.63
Nek1P51954 Gm20472-201ENSMUST00000174403 1240 ntBASIC19■□□□□ 0.63
Nek1P51954 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19■□□□□ 0.63
Nek1P51954 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19■□□□□ 0.63
Nek1P51954 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19■□□□□ 0.63
Nek1P51954 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Gm9987-201ENSMUST00000069768 567 ntBASIC19■□□□□ 0.63
Nek1P51954 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19■□□□□ 0.63
Nek1P51954 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nek1P51954 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nek1P51954 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.99■□□□□ 0.63
Nek1P51954 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nek1P51954 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.99■□□□□ 0.63
Nek1P51954 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nek1P51954 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nek1P51954 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nek1P51954 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.98■□□□□ 0.63
Nek1P51954 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nek1P51954 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Gm42545-201ENSMUST00000202755 922 ntBASIC18.98■□□□□ 0.63
Nek1P51954 Gm18025-201ENSMUST00000221733 862 ntBASIC18.98■□□□□ 0.63
Nek1P51954 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nek1P51954 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nek1P51954 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Nek1P51954 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.97■□□□□ 0.63
Nek1P51954 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.97■□□□□ 0.63
Nek1P51954 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.97■□□□□ 0.63
Nek1P51954 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nek1P51954 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms