Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lhx3P50481 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.29■□□□□ 0.36
Lhx3P50481 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lhx3P50481 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.29■□□□□ 0.36
Lhx3P50481 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.29■□□□□ 0.36
Lhx3P50481 Gm7977-201ENSMUST00000193787 748 ntBASIC17.29■□□□□ 0.36
Lhx3P50481 Gm21559-201ENSMUST00000220638 855 ntBASIC17.29■□□□□ 0.36
Lhx3P50481 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lhx3P50481 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lhx3P50481 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lhx3P50481 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Gm8587-201ENSMUST00000076538 843 ntBASIC17.29■□□□□ 0.36
Lhx3P50481 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.29■□□□□ 0.36
Lhx3P50481 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.29■□□□□ 0.36
Lhx3P50481 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx3P50481 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.28■□□□□ 0.36
Lhx3P50481 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.28■□□□□ 0.36
Lhx3P50481 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx3P50481 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lhx3P50481 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lhx3P50481 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lhx3P50481 Gm6659-201ENSMUST00000174752 547 ntBASIC17.27■□□□□ 0.36
Lhx3P50481 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx3P50481 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.27■□□□□ 0.36
Lhx3P50481 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lhx3P50481 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx3P50481 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx3P50481 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx3P50481 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Lhx3P50481 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lhx3P50481 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Gm26039-201ENSMUST00000158152 144 ntBASIC17.26■□□□□ 0.35
Lhx3P50481 Gm27389-201ENSMUST00000183622 195 ntBASIC17.26■□□□□ 0.35
Lhx3P50481 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx3P50481 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Gm13186-201ENSMUST00000118031 316 ntBASIC17.25■□□□□ 0.35
Lhx3P50481 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lhx3P50481 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.25■□□□□ 0.35
Lhx3P50481 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Lhx3P50481 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.25■□□□□ 0.35
Lhx3P50481 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lhx3P50481 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lhx3P50481 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lhx3P50481 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx3P50481 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx3P50481 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx3P50481 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx3P50481 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.24■□□□□ 0.35
Lhx3P50481 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx3P50481 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lhx3P50481 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.24■□□□□ 0.35
Lhx3P50481 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms