Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.17■□□□□ 0.66
Brca1P48754 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.17■□□□□ 0.66
Brca1P48754 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.17■□□□□ 0.66
Brca1P48754 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.16■□□□□ 0.66
Brca1P48754 Gm27867-201ENSMUST00000184778 125 ntBASIC19.16■□□□□ 0.66
Brca1P48754 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Brca1P48754 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Brca1P48754 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Brca1P48754 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.16■□□□□ 0.66
Brca1P48754 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Brca1P48754 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Brca1P48754 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.15■□□□□ 0.66
Brca1P48754 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Brca1P48754 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.15■□□□□ 0.66
Brca1P48754 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brca1P48754 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Brca1P48754 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Brca1P48754 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Brca1P48754 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Gm6736-201ENSMUST00000166583 948 ntBASIC19.14■□□□□ 0.65
Brca1P48754 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.14■□□□□ 0.65
Brca1P48754 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brca1P48754 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.13■□□□□ 0.65
Brca1P48754 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.13■□□□□ 0.65
Brca1P48754 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brca1P48754 Gm23935-201ENSMUST00000102303 57 ntBASIC19.13■□□□□ 0.65
Brca1P48754 Gm24270-201ENSMUST00000102326 57 ntBASIC19.13■□□□□ 0.65
Brca1P48754 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brca1P48754 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.13■□□□□ 0.65
Brca1P48754 Gm24245-201ENSMUST00000157318 57 ntBASIC19.13■□□□□ 0.65
Brca1P48754 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brca1P48754 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
Brca1P48754 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.13■□□□□ 0.65
Brca1P48754 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.13■□□□□ 0.65
Brca1P48754 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.13■□□□□ 0.65
Brca1P48754 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brca1P48754 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brca1P48754 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Brca1P48754 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.12■□□□□ 0.65
Brca1P48754 Psmb5-202ENSMUST00000227257 622 ntBASIC19.12■□□□□ 0.65
Brca1P48754 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brca1P48754 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Brca1P48754 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Gm15165-201ENSMUST00000118140 502 ntBASIC19.11■□□□□ 0.65
Brca1P48754 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.11■□□□□ 0.65
Brca1P48754 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Brca1P48754 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Brca1P48754 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms