Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdx2P43241 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdx2P43241 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.18■□□□□ 0.18
Cdx2P43241 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdx2P43241 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdx2P43241 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdx2P43241 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.18■□□□□ 0.18
Cdx2P43241 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdx2P43241 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdx2P43241 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdx2P43241 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.17■□□□□ 0.18
Cdx2P43241 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdx2P43241 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdx2P43241 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.17■□□□□ 0.18
Cdx2P43241 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.17■□□□□ 0.18
Cdx2P43241 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdx2P43241 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdx2P43241 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdx2P43241 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdx2P43241 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cdx2P43241 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Gm18733-201ENSMUST00000173950 856 ntBASIC16.16■□□□□ 0.18
Cdx2P43241 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdx2P43241 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdx2P43241 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdx2P43241 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdx2P43241 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdx2P43241 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.15■□□□□ 0.18
Cdx2P43241 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cdx2P43241 Gm15372-201ENSMUST00000120729 834 ntBASIC16.15■□□□□ 0.18
Cdx2P43241 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.15■□□□□ 0.18
Cdx2P43241 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdx2P43241 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdx2P43241 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdx2P43241 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdx2P43241 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.14■□□□□ 0.17
Cdx2P43241 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Cdx2P43241 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdx2P43241 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdx2P43241 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdx2P43241 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdx2P43241 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cdx2P43241 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdx2P43241 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdx2P43241 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.13■□□□□ 0.17
Cdx2P43241 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdx2P43241 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.13■□□□□ 0.17
Cdx2P43241 Gm18195-201ENSMUST00000207604 706 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms