Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HttP42859 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HttP42859 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HttP42859 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HttP42859 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Gm13036-201ENSMUST00000117799 748 ntBASIC18.25■□□□□ 0.51
HttP42859 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HttP42859 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.25■□□□□ 0.51
HttP42859 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.25■□□□□ 0.51
HttP42859 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HttP42859 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.24■□□□□ 0.51
HttP42859 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.24■□□□□ 0.51
HttP42859 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.24■□□□□ 0.51
HttP42859 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.24■□□□□ 0.51
HttP42859 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HttP42859 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HttP42859 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HttP42859 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.24■□□□□ 0.51
HttP42859 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HttP42859 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HttP42859 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HttP42859 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.23■□□□□ 0.51
HttP42859 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Gm4535-201ENSMUST00000182274 558 ntBASIC18.23■□□□□ 0.51
HttP42859 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Gm8396-201ENSMUST00000057361 823 ntBASIC18.23■□□□□ 0.51
HttP42859 Gm10355-201ENSMUST00000097146 517 ntBASIC18.23■□□□□ 0.51
HttP42859 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HttP42859 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.23■□□□□ 0.51
HttP42859 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.23■□□□□ 0.51
HttP42859 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.23■□□□□ 0.51
HttP42859 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.23■□□□□ 0.51
HttP42859 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.23■□□□□ 0.51
HttP42859 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HttP42859 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.22■□□□□ 0.51
HttP42859 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HttP42859 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
HttP42859 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.22■□□□□ 0.51
HttP42859 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.22■□□□□ 0.51
HttP42859 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 AA543401-201ENSMUST00000164248 1269 ntBASIC18.22■□□□□ 0.51
HttP42859 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.22■□□□□ 0.51
HttP42859 Gm6089-201ENSMUST00000197666 938 ntBASIC18.22■□□□□ 0.51
HttP42859 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HttP42859 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.21■□□□□ 0.51
HttP42859 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HttP42859 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HttP42859 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HttP42859 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms