Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.97□□□□□ -0.17
Timp3P39876 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Timp3P39876 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Timp3P39876 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Gm2274-201ENSMUST00000184539 609 ntBASIC13.96□□□□□ -0.17
Timp3P39876 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Timp3P39876 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Timp3P39876 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Timp3P39876 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.96□□□□□ -0.18
Timp3P39876 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Timp3P39876 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.95□□□□□ -0.18
Timp3P39876 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.95□□□□□ -0.18
Timp3P39876 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.95□□□□□ -0.18
Timp3P39876 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.95□□□□□ -0.18
Timp3P39876 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.95□□□□□ -0.18
Timp3P39876 Gm45058-201ENSMUST00000205810 766 ntBASIC13.95□□□□□ -0.18
Timp3P39876 Gm29791-202ENSMUST00000207888 369 ntBASIC13.95□□□□□ -0.18
Timp3P39876 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.95□□□□□ -0.18
Timp3P39876 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Timp3P39876 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Timp3P39876 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Timp3P39876 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.94□□□□□ -0.18
Timp3P39876 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.94□□□□□ -0.18
Timp3P39876 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.94□□□□□ -0.18
Timp3P39876 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.94□□□□□ -0.18
Timp3P39876 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Timp3P39876 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Timp3P39876 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Timp3P39876 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Timp3P39876 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp3P39876 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp3P39876 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Timp3P39876 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.93□□□□□ -0.18
Timp3P39876 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp3P39876 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.93□□□□□ -0.18
Timp3P39876 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.93□□□□□ -0.18
Timp3P39876 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.93□□□□□ -0.18
Timp3P39876 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.93□□□□□ -0.18
Timp3P39876 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.93□□□□□ -0.18
Timp3P39876 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms