Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.8■□□□□ 0.28
HmgclP38060 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.8■□□□□ 0.28
HmgclP38060 Gm27000-201ENSMUST00000182943 842 ntBASIC16.8■□□□□ 0.28
HmgclP38060 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HmgclP38060 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.8■□□□□ 0.28
HmgclP38060 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.8■□□□□ 0.28
HmgclP38060 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.79■□□□□ 0.28
HmgclP38060 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Gm30025-201ENSMUST00000218555 728 ntBASIC16.79■□□□□ 0.28
HmgclP38060 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HmgclP38060 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.79■□□□□ 0.28
HmgclP38060 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HmgclP38060 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HmgclP38060 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HmgclP38060 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HmgclP38060 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
HmgclP38060 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HmgclP38060 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.78■□□□□ 0.28
HmgclP38060 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.78■□□□□ 0.28
HmgclP38060 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.78■□□□□ 0.28
HmgclP38060 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HmgclP38060 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HmgclP38060 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HmgclP38060 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HmgclP38060 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HmgclP38060 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.77■□□□□ 0.28
HmgclP38060 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
HmgclP38060 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HmgclP38060 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HmgclP38060 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HmgclP38060 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HmgclP38060 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HmgclP38060 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HmgclP38060 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HmgclP38060 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HmgclP38060 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.76■□□□□ 0.27
HmgclP38060 Gm18958-201ENSMUST00000174258 762 ntBASIC16.76■□□□□ 0.27
HmgclP38060 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.76■□□□□ 0.27
HmgclP38060 Gm10252-201ENSMUST00000209541 832 ntBASIC16.76■□□□□ 0.27
HmgclP38060 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HmgclP38060 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms