Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LdlrP35951 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.97■□□□□ 0.31
LdlrP35951 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LdlrP35951 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LdlrP35951 Gm37055-201ENSMUST00000191866 133 ntBASIC16.97■□□□□ 0.31
LdlrP35951 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.97■□□□□ 0.31
LdlrP35951 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LdlrP35951 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.97■□□□□ 0.31
LdlrP35951 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.96■□□□□ 0.31
LdlrP35951 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LdlrP35951 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LdlrP35951 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LdlrP35951 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Mir1199-201ENSMUST00000117015 119 ntBASIC16.96■□□□□ 0.31
LdlrP35951 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LdlrP35951 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.96■□□□□ 0.31
LdlrP35951 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LdlrP35951 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LdlrP35951 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LdlrP35951 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LdlrP35951 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.96■□□□□ 0.31
LdlrP35951 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.96■□□□□ 0.31
LdlrP35951 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LdlrP35951 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.96■□□□□ 0.3
LdlrP35951 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LdlrP35951 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LdlrP35951 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LdlrP35951 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LdlrP35951 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Gm15378-201ENSMUST00000121894 207 ntBASIC16.95■□□□□ 0.3
LdlrP35951 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LdlrP35951 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.95■□□□□ 0.3
LdlrP35951 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.95■□□□□ 0.3
LdlrP35951 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.95■□□□□ 0.3
LdlrP35951 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LdlrP35951 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LdlrP35951 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LdlrP35951 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LdlrP35951 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.94■□□□□ 0.3
LdlrP35951 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.94■□□□□ 0.3
LdlrP35951 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LdlrP35951 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms