Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp13P33435 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.46■□□□□ 0.38
Mmp13P33435 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.45■□□□□ 0.38
Mmp13P33435 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp13P33435 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Mmp13P33435 Gm15375-201ENSMUST00000119510 849 ntBASIC17.45■□□□□ 0.38
Mmp13P33435 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.45■□□□□ 0.38
Mmp13P33435 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.45■□□□□ 0.38
Mmp13P33435 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp13P33435 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.45■□□□□ 0.38
Mmp13P33435 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp13P33435 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp13P33435 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Mmp13P33435 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Gm13216-201ENSMUST00000117145 591 ntBASIC17.44■□□□□ 0.38
Mmp13P33435 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Mmp13P33435 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Mmp13P33435 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp13P33435 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.43■□□□□ 0.38
Mmp13P33435 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Mmp13P33435 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Mmp13P33435 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp13P33435 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mmp13P33435 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.42■□□□□ 0.38
Mmp13P33435 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Mmp13P33435 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Mmp13P33435 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp13P33435 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.42■□□□□ 0.38
Mmp13P33435 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Mmp13P33435 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Mmp13P33435 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.41■□□□□ 0.38
Mmp13P33435 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.41■□□□□ 0.38
Mmp13P33435 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Gm6576-201ENSMUST00000169678 883 ntBASIC17.41■□□□□ 0.38
Mmp13P33435 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.41■□□□□ 0.38
Mmp13P33435 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms