Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Slc6a1P31648 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Slc6a1P31648 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.69□□□□□ -0.06
Slc6a1P31648 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.69□□□□□ -0.06
Slc6a1P31648 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Slc6a1P31648 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Slc6a1P31648 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.69□□□□□ -0.06
Slc6a1P31648 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Slc6a1P31648 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Slc6a1P31648 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc6a1P31648 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.67□□□□□ -0.06
Slc6a1P31648 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Slc6a1P31648 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Slc6a1P31648 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.67□□□□□ -0.06
Slc6a1P31648 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc6a1P31648 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Slc6a1P31648 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms