Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.24□□□□□ -0.13
Col8a2P25318 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col8a2P25318 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col8a2P25318 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col8a2P25318 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col8a2P25318 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col8a2P25318 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Gm16061-201ENSMUST00000122167 857 ntBASIC14.23□□□□□ -0.13
Col8a2P25318 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.23□□□□□ -0.13
Col8a2P25318 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col8a2P25318 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col8a2P25318 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col8a2P25318 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col8a2P25318 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col8a2P25318 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col8a2P25318 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col8a2P25318 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Col8a2P25318 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.22□□□□□ -0.13
Col8a2P25318 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.22□□□□□ -0.13
Col8a2P25318 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.22□□□□□ -0.13
Col8a2P25318 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.22□□□□□ -0.13
Col8a2P25318 Gm6345-202ENSMUST00000180900 204 ntBASIC14.22□□□□□ -0.13
Col8a2P25318 Gm27000-201ENSMUST00000182943 842 ntBASIC14.22□□□□□ -0.13
Col8a2P25318 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
Col8a2P25318 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.22□□□□□ -0.13
Col8a2P25318 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Col8a2P25318 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.22□□□□□ -0.13
Col8a2P25318 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Col8a2P25318 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col8a2P25318 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.21□□□□□ -0.13
Col8a2P25318 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.21□□□□□ -0.13
Col8a2P25318 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col8a2P25318 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Gm21559-201ENSMUST00000220638 855 ntBASIC14.21□□□□□ -0.13
Col8a2P25318 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Gm8587-201ENSMUST00000076538 843 ntBASIC14.21□□□□□ -0.13
Col8a2P25318 Gm10819-201ENSMUST00000099988 561 ntBASIC14.21□□□□□ -0.13
Col8a2P25318 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col8a2P25318 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col8a2P25318 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col8a2P25318 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col8a2P25318 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.21□□□□□ -0.14
Col8a2P25318 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col8a2P25318 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms