Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.27■□□□□ 0.51
Aldh1a1P24549 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Aldh1a1P24549 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.27■□□□□ 0.51
Aldh1a1P24549 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aldh1a1P24549 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Aldh1a1P24549 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.26■□□□□ 0.51
Aldh1a1P24549 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Gm27525-201ENSMUST00000184465 107 ntBASIC18.26■□□□□ 0.51
Aldh1a1P24549 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.26■□□□□ 0.51
Aldh1a1P24549 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Aldh1a1P24549 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Aldh1a1P24549 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.25■□□□□ 0.51
Aldh1a1P24549 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.25■□□□□ 0.51
Aldh1a1P24549 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Golph3-205ENSMUST00000228671 2842 ntBASIC18.25■□□□□ 0.51
Aldh1a1P24549 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Aldh1a1P24549 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.24■□□□□ 0.51
Aldh1a1P24549 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.24■□□□□ 0.51
Aldh1a1P24549 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.24■□□□□ 0.51
Aldh1a1P24549 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.24■□□□□ 0.51
Aldh1a1P24549 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Aldh1a1P24549 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Gm13312-201ENSMUST00000119631 718 ntBASIC18.23■□□□□ 0.51
Aldh1a1P24549 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Aldh1a1P24549 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.22■□□□□ 0.51
Aldh1a1P24549 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Gm29707-201ENSMUST00000196325 491 ntBASIC18.22■□□□□ 0.51
Aldh1a1P24549 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Gm6376-201ENSMUST00000209407 580 ntBASIC18.22■□□□□ 0.51
Aldh1a1P24549 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.22■□□□□ 0.51
Aldh1a1P24549 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Aldh1a1P24549 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms