Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.57■□□□□ 0.56
Pde6bP23440 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pde6bP23440 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.57■□□□□ 0.56
Pde6bP23440 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
Pde6bP23440 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Pde6bP23440 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pde6bP23440 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6bP23440 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pde6bP23440 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pde6bP23440 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.56■□□□□ 0.56
Pde6bP23440 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Pde6bP23440 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pde6bP23440 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pde6bP23440 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pde6bP23440 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.55■□□□□ 0.56
Pde6bP23440 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.55■□□□□ 0.56
Pde6bP23440 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pde6bP23440 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.55■□□□□ 0.56
Pde6bP23440 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.55■□□□□ 0.56
Pde6bP23440 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Pde6bP23440 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pde6bP23440 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pde6bP23440 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.54■□□□□ 0.56
Pde6bP23440 Gm26039-201ENSMUST00000158152 144 ntBASIC18.54■□□□□ 0.56
Pde6bP23440 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.54■□□□□ 0.56
Pde6bP23440 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pde6bP23440 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pde6bP23440 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pde6bP23440 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pde6bP23440 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pde6bP23440 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Pde6bP23440 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 Gm17808-201ENSMUST00000200859 894 ntBASIC18.53■□□□□ 0.56
Pde6bP23440 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.53■□□□□ 0.56
Pde6bP23440 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pde6bP23440 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pde6bP23440 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pde6bP23440 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.53■□□□□ 0.56
Pde6bP23440 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pde6bP23440 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms