Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.43■□□□□ 0.38
VimP20152 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VimP20152 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
VimP20152 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VimP20152 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VimP20152 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VimP20152 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VimP20152 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VimP20152 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VimP20152 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.42■□□□□ 0.38
VimP20152 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VimP20152 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VimP20152 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
VimP20152 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.42■□□□□ 0.38
VimP20152 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VimP20152 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.41■□□□□ 0.38
VimP20152 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
VimP20152 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.41■□□□□ 0.38
VimP20152 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.41■□□□□ 0.38
VimP20152 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VimP20152 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VimP20152 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VimP20152 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VimP20152 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.4■□□□□ 0.38
VimP20152 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.4■□□□□ 0.38
VimP20152 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VimP20152 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
VimP20152 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VimP20152 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.4■□□□□ 0.38
VimP20152 Gm9847-201ENSMUST00000052528 599 ntBASIC17.4■□□□□ 0.38
VimP20152 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VimP20152 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VimP20152 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VimP20152 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VimP20152 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
VimP20152 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VimP20152 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.39■□□□□ 0.38
VimP20152 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
VimP20152 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VimP20152 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.39■□□□□ 0.37
VimP20152 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.39■□□□□ 0.37
VimP20152 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VimP20152 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VimP20152 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VimP20152 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VimP20152 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VimP20152 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VimP20152 Mir8112-201ENSMUST00000184382 131 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms